• Version:
  • 10.5 (archived version)
STRINGSTRING
hyaD hyaD WA34_20510 WA34_20510 gtf1 gtf1 secY2 secY2 WA34_20520 WA34_20520 nss nss gtf2 gtf2 RDF_1395 RDF_1395 asp1 asp1 asp2 asp2 asp3 asp3
"WA34_20520" - Hypothetical protein in Streptococcus agalactiae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WA34_20520Hypothetical protein (398 aa)    
Predicted Functional Partners:
nss
Hypothetical protein (335 aa)
   
  0.989
gtf1
Glycosyl transferase, group 1 family protein; An N-acetylglucosaminyl transferase that is part of the accessory SecA2/SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon (502 aa)
 
 
  0.956
asp1
Hypothetical protein (514 aa)
         
  0.863
RDF_1395
Hypothetical protein (62 aa)
         
  0.850
asp2
Hypothetical protein (519 aa)
         
  0.783
asp3
Hypothetical protein (330 aa)
         
  0.783
secY2
Preprotein translocase subunit SecY; Part of the accessory SecA2/SecY2 system specifically required for export of possible cell wall proteins. The central subunit of a protein translocation channel (409 aa)
 
     
  0.782
hyaD
Glycosyl transferase, group 2 family protein (291 aa)
 
   
  0.779
gtf2
Hypothetical protein; A stabilizing protein that is part of the accessory SecA2/SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1 (441 aa)
       
  0.774
WA34_20510
Hypothetical protein (394 aa)
     
  0.770
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 211110
Other names: S. agalactiae, S. agalactiae NEM316, S. agalactiae serogroup III, Streptoccocus de la mammite, Streptococcus agalactiae, Streptococcus agalactiae (serotype III), Streptococcus agalactiae NEM316, Streptococcus agalactiae contagiosae, Streptococcus agalactiae serogroup III, Streptococcus agalactiae str. NEM316, Streptococcus difficile, Streptococcus difficilis, Streptococcus mastitidis
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