• Version:
  • 10.5 (archived version)
STRINGSTRING
WA34_20505 WA34_20505 hyaD hyaD gspA_1 gspA_1 WA34_20510 WA34_20510 WA34_20520 WA34_20520 gtf1 gtf1 nss nss asp3 asp3 secY2 secY2 WA34_20545 WA34_20545 asp1 asp1
"nss" - Hypothetical protein in Streptococcus agalactiae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nssHypothetical protein (335 aa)    
Predicted Functional Partners:
WA34_20520
Hypothetical protein (398 aa)
   
  0.989
gtf1
Glycosyl transferase, group 1 family protein; An N-acetylglucosaminyl transferase that is part of the accessory SecA2/SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon (502 aa)
 
   
  0.950
gspA_1
Hypothetical protein (401 aa)
        0.936
WA34_20510
Hypothetical protein (394 aa)
 
        0.916
WA34_20505
Hypothetical protein (413 aa)
 
        0.913
hyaD
Glycosyl transferase, group 2 family protein (291 aa)
   
        0.862
asp1
Hypothetical protein (514 aa)
         
  0.835
WA34_20545
Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane (795 aa)
         
  0.832
secY2
Preprotein translocase subunit SecY; Part of the accessory SecA2/SecY2 system specifically required for export of possible cell wall proteins. The central subunit of a protein translocation channel (409 aa)
         
  0.828
asp3
Hypothetical protein (330 aa)
         
  0.823
Your Current Organism:
Streptococcus agalactiae
NCBI taxonomy Id: 211110
Other names: S. agalactiae, S. agalactiae NEM316, S. agalactiae serogroup III, Streptoccocus de la mammite, Streptococcus agalactiae, Streptococcus agalactiae (serotype III), Streptococcus agalactiae NEM316, Streptococcus agalactiae contagiosae, Streptococcus agalactiae serogroup III, Streptococcus agalactiae str. NEM316, Streptococcus difficile, Streptococcus difficilis, Streptococcus mastitidis
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