• Version:
  • 10.5 (archived version)
STRINGSTRING
Saci_1499 Saci_1499 Saci_1262 Saci_1262 upp upp gnpTA gnpTA gltX gltX fni fni sepP sepP rps2 rps2 rpl13 rpl13 pgmB pgmB gds gds
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
gnpTAUDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (328 aa)    
Predicted Functional Partners:
gds
Geranylgeranyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl pyrophosphate with the allylic pyrophosphates to yield geranylgeranyl diphosphate (GGPP) which is a precursor of the ether-linked lipids. It is able to use dimethylallyl diphosphate (DMAPP), geranyl diphosphate (GPP), and (all-E)-geranyl diphosphate (E-FPP) as an allylic substrate (330 aa)
   
   
  0.948
fni
Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) (303 aa)
         
  0.944
Saci_1262
Hypothetical protein (327 aa)
   
 
  0.855
rps2
30S ribosomal protein S2 (225 aa)
 
     
  0.847
pgmB
Beta-phosphoglucomutase (216 aa)
              0.792
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (216 aa)
         
  0.779
rpl13
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (148 aa)
 
     
  0.689
gltX
glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction- glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) (567 aa)
   
   
  0.682
sepP
Hypothetical protein (206 aa)
     
   
  0.670
Saci_1499
Membrane glocosyltransferase (464 aa)
   
  0.665
Your Current Organism:
Sulfolobus acidocaldarius
NCBI taxonomy Id: 330779
Other names: S. acidocaldarius, S. acidocaldarius DSM 639, Sulfolobus acidocaldarius, Sulfolobus acidocaldarius ATCC 33909, Sulfolobus acidocaldarius DSM 639, Sulfolobus acidocaldarius NCIB 11770
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