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STRINGSTRING
SCO3154 SCO3154 SCO6635 SCO6635 SCO1014 SCO1014 SCO3896 SCO3896 SCO1423 SCO1423 SCO4658 SCO4658 SCO1422 SCO1422 SCO0185 SCO0185 vanX vanX
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCO1423Glycosyl transferase (302 aa)    
Predicted Functional Partners:
SCO1014
Transferase; Transfers the fatty acyl group on membrane lipoproteins (537 aa)
         
  0.859
SCO3154
Hypothetical protein (591 aa)
    
     
  0.834
SCO4658
Glucosyltransferase (345 aa)
 
   
 
0.814
SCO6635
Bacteriophage resistance gene pglY (1294 aa)
            
  0.744
SCO1422
Hypothetical protein (194 aa)
              0.725
vanX
D-alanine-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. May play a role in immunity or defense against glycopeptide antibiotics (perhaps at a moderate level) in the soil environment. Might confer vancomycin resistance to S.coelicolor (202 aa)
            
  0.557
SCO0185
Geranylgeranyl pyrophosphate synthase (392 aa)
    
          0.450
SCO3896
RNA nucleotidyltransferase (483 aa)
    
          0.437
Your Current Organism:
Streptomyces coelicolor
NCBI taxonomy Id: 100226
Other names: Actinomyces coelicolor, Cladothrix coelicolor, Nocardia coelicolor, S. coelicolor, S. coelicolor A3(2), Streptococcus coelicolor, Streptomyces coelicolor, Streptomyces coelicolor A3(2), Streptomyces coelicolor subspecies coelicolor, Streptomyces sp. HHFA2, Streptothrix coelicolor
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