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STRINGSTRING
MCON_1952 MCON_1952 endA endA MCON_0721 MCON_0721 MCON_2842 MCON_2842 MCON_1060 MCON_1060 rpa rpa MCON_1550 MCON_1550 MCON_1545 MCON_1545 top6A top6A MCON_1549 MCON_1549 top6B top6B
← Your query returned:
"MCON_1550" - Hypothetical protein in Methanosaeta concilii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCON_1550Hypothetical protein (296 aa)    
Predicted Functional Partners:
rpa
Single-stranded DNA-binding replication protein A (409 aa)
 
     
  0.984
MCON_2842
OB-fold nucleic acid binding domain-containing protein (371 aa)
 
     
  0.851
MCON_1952
Ser/Thr protein phosphatase family protein (264 aa)
 
     
  0.815
top6A
DNA topoisomerase VI subunit A; Relaxes both positive and negative superturns and exhibits a strong decatenase activity (375 aa)
 
          0.779
MCON_1545
Hypothetical protein (60 aa)
 
          0.774
top6B
DNA topoisomerase VI subunit B; Relaxes both positive and negative superturns and exhibits a strong decatenase activity (611 aa)
 
          0.752
MCON_1549
AsnC family transcriptional regulator (76 aa)
 
          0.751
endA
tRNA-splicing endonuclease; Endonuclease that removes tRNA introns. Cleaves pre-tRNA at the 5’ and 3’ splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2’,3’ cyclic phosphate and 5’-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp (350 aa)
    
     
  0.671
MCON_1060
Hypothetical protein (121 aa)
 
          0.660
MCON_0721
Hypothetical protein (149 aa)
 
          0.659
Your Current Organism:
Methanosaeta concilii
NCBI taxonomy Id: 990316
Other names: M. concilii, M. concilii GP6, Methanisaeta concilii, Methanosaeta concilii, Methanosaeta concilii DSM 3671, Methanosaeta concilii GP6, Methanosaeta concilii str. GP6, Methanosaeta concilii strain GP6, Methanothrix soehngenii
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