• Version:
  • 10.5 (archived version)
STRINGSTRING
wbpJ wbpJ wbpB wbpB wzy wzy wbpE wbpE wbpD wbpD wbpA wbpA wbpK wbpK wbpL wbpL wzx wzx wbpH wbpH wbpI wbpI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
wbpBUDP-2-acetamido-2-deoxy-d-glucuronic acid 3-dehydrogenase WbpB; Plays a role in the biosynthesis of B-band O antigen for serotype O5. Catalyzes the NAD-dependent oxidation of UDP-N- acetylglucosaminuronic acid (UDP-D-GlcNAcA) to UDP-2-acetamido-2- deoxy-3-oxo-D-glucuronic acid (UDP-3-oxo-D-GlcNAcA). Can not use UDP-GlcNAc or UDP-GalNAc as the nucleotide sugar substrate, and can use only poorly UDP-D-glucuronic acid (UDP-GlcA). Undergoes an NAD(+) recycling mechanism using 2-oxoglutarate as an oxidant (316 aa)    
Predicted Functional Partners:
wbpE
UDP-2-acetamido-2-dideoxy-d-ribo-hex-3-uluronic acid transaminase WbpE; Plays a role in the biosynthesis of B-band O antigen for serotype O5. Catalyzes the amination of UDP-2-acetamido-2-deoxy-3- oxo-D-glucuronic acid (UDP-3-oxo-D-GlcNAcA) to UDP-2-acetamido-3- amino-2,3-dideoxy-D-glucuronic acid (UDP-GlcNAc3NA), using L- glutamate as the preferred amine donor (359 aa)
 
 
  0.999
wbpA
UDP-N-acetyl-d-glucosamine 6-dehydrogenase; Plays a role in the biosynthesis of B-band O antigen for serotype O5. Catalyzes the C-6 dehydrogenation of UDP-D-GlcNAc to UDP-N-acetylglucosaminuronic acid (UDP-D-GlcNAcA) (436 aa)
 
 
  0.998
wbpD
UDP-2-acetamido-3-amino-23-dideoxy-d-glucuronic acid N-acetyltransferase WbpD; Plays a role in the biosynthesis of B-band O antigen for serotype O5. Catalyzes the transfer of an acetyl group to the C-3 amino position of UDP-2-acetamido-3-amino-2,3-dideoxy-alpha-D- glucuronate (UDP-D-GlcNAc3NA) (191 aa)
 
   
  0.993
wzx
O-antigen translocase (411 aa)
 
   
  0.981
wbpI
UDP-N-acetylglucosamine 2-epimerase; Plays a role in the biosynthesis of B-band O antigen for serotype O5. Catalyzes the epimerization of UDP-2,3-diacetamido- 2,3-dideoxy-alpha-D-glucuronic acid (UDP-alpha-D-GlcNAc3NAcA) to UDP-2,3-diacetamido-2,3-dideoxy-alpha-D-mannuronic acid (UDP- alpha-D-ManNAc3NAcA). Exhibits high specificity towards the substrate as UDP-alpha-D-GlcNAc, UDP-alpha-D-GlcNAcA (UDP-2- acetamido-2-deoxy-alpha-D-glucuronic acid) and UDP-alpha-D- GlcNAc3NAc (UDP-2,3-diacetamido-2,3-dideoxy-alpha-D-glucose) cannot act as substrates (354 aa)
 
   
  0.973
wbpH
Glycosyltransferase WbpH (373 aa)
 
   
  0.950
wbpJ
Glycosyl transferase WbpJ (413 aa)
 
   
  0.945
wbpK
NAD-dependent epimerase/dehydratase (316 aa)
   
   
  0.935
wbpL
Glycosyltransferase WbpL (339 aa)
   
   
  0.891
wzy
B-band O-antigen polymerase (438 aa)
   
   
  0.879
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 208964
Other names: Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, Micrococcus pyocyaneus, P. aeruginosa, P. aeruginosa PAO1, Pseudomonas aeruginosa, Pseudomonas aeruginosa PAO1, Pseudomonas aeruginosa str. PAO1, Pseudomonas polycolor, Pseudomonas pyocyanea, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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