tot protein (Haloarcula marismortui) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

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[Homology]

Score

tot

Transmembrane oligosaccharyl transferase (937 aa)

Predicted Functional Partners:

secY

0.909

exoM

0.884

rrnAC3242

0.816

dpg

0.813

lpg3

0.777

cyo

0.760

sec11b

0.730

sec11a

0.730

rrnAC2744

0.692

atpF

0.682

Your Current Organism:

Haloarcula marismortui

NCBI taxonomy Id: 272569
Other names: Flavobacterium (Halobacterium) maris-mortui, H. marismortui, H. marismortui ATCC 43049, Haloarcula marismortui, Haloarcula marismortui ATCC 43049, Haloarcula marismortui marismortui, Haloarcula marismortui str. ATCC 43049, Haloarcula marismortui strain ATCC 43049, Haloarcula marismortui subsp. marismortui, Halobacterium marismortui

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
atpF	cyo	rrnAC3158	rrnAC1407	V-type ATP synthase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane	Cytochrome oxidase subunit I-like	0.690
atpF	rrnAC2744	rrnAC3158	rrnAC2744	V-type ATP synthase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane	Replication factor A	0.699
atpF	sec11a	rrnAC3158	rrnAC2712	V-type ATP synthase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane	Signal sequence peptidase	0.706
atpF	sec11b	rrnAC3158	rrnAC2713	V-type ATP synthase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane	Signal sequence peptidase	0.705
atpF	tot	rrnAC3158	rrnAC0431	V-type ATP synthase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane	Transmembrane oligosaccharyl transferase	0.682
cyo	atpF	rrnAC1407	rrnAC3158	Cytochrome oxidase subunit I-like	V-type ATP synthase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane	0.690
cyo	rrnAC2744	rrnAC1407	rrnAC2744	Cytochrome oxidase subunit I-like	Replication factor A	0.688
cyo	sec11a	rrnAC1407	rrnAC2712	Cytochrome oxidase subunit I-like	Signal sequence peptidase	0.688
cyo	sec11b	rrnAC1407	rrnAC2713	Cytochrome oxidase subunit I-like	Signal sequence peptidase	0.685
cyo	tot	rrnAC1407	rrnAC0431	Cytochrome oxidase subunit I-like	Transmembrane oligosaccharyl transferase	0.760
dpg	exoM	rrnAC1873	rrnAC0430	dolichol-P-glucose synthetase	Succinoglycan biosynthesis protein	0.640
dpg	lpg3	rrnAC1873	rrnAC0429	dolichol-P-glucose synthetase	LPS glycosyltransferase	0.829
dpg	rrnAC3242	rrnAC1873	rrnAC3242	dolichol-P-glucose synthetase	Hypothetical protein	0.725
dpg	sec11a	rrnAC1873	rrnAC2712	dolichol-P-glucose synthetase	Signal sequence peptidase	0.588
dpg	sec11b	rrnAC1873	rrnAC2713	dolichol-P-glucose synthetase	Signal sequence peptidase	0.585
dpg	secY	rrnAC1873	rrnAC1589	dolichol-P-glucose synthetase	Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently	0.671
dpg	tot	rrnAC1873	rrnAC0431	dolichol-P-glucose synthetase	Transmembrane oligosaccharyl transferase	0.813
exoM	dpg	rrnAC0430	rrnAC1873	Succinoglycan biosynthesis protein	dolichol-P-glucose synthetase	0.640
exoM	lpg3	rrnAC0430	rrnAC0429	Succinoglycan biosynthesis protein	LPS glycosyltransferase	0.951
exoM	rrnAC3242	rrnAC0430	rrnAC3242	Succinoglycan biosynthesis protein	Hypothetical protein	0.548

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