pglB protein (Campylobacter concisus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

pglB

Iron chelatin ABC transporter permease (699 aa)

Predicted Functional Partners:

pglI

0.906

pglC

0.899

CCC13826_0446

0.895

pglJ

0.890

pglH2

0.888

pglH1

0.888

pglD

0.887

pglA

0.884

CCC13826_0460

0.874

pglK

0.859

Your Current Organism:

Campylobacter concisus

NCBI taxonomy Id: 360104
Other names: C. concisus, C. concisus 13826, Campylobacter concisus, Campylobacter concisus 13826, Campylobacter concisus str. 13826, Campylobacter concisus strain 13826

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCC13826_0446	CCC13826_0460	CCC13826_0446	CCC13826_0460	Hypothetical protein	Hydroxylamine reductase (hybrid-cluster protein; HCP)	0.882
CCC13826_0446	pglA	CCC13826_0446	CCC13826_0451	Hypothetical protein	Iron compounds ABC transporter ATP-binding protein	0.726
CCC13826_0446	pglB	CCC13826_0446	CCC13826_0452	Hypothetical protein	Iron chelatin ABC transporter permease	0.895
CCC13826_0446	pglC	CCC13826_0446	CCC13826_0450	Hypothetical protein	Cpp29	0.698
CCC13826_0446	pglD	CCC13826_0446	CCC13826_0449	Hypothetical protein	General glycosylation pathway protein	0.700
CCC13826_0446	pglH1	CCC13826_0446	CCC13826_0454	Hypothetical protein	Nitric oxide reductase large subunit	0.716
CCC13826_0446	pglH2	CCC13826_0446	CCC13826_0455	Hypothetical protein	Glycosyl transferase group 1	0.716
CCC13826_0446	pglI	CCC13826_0446	CCC13826_0456	Hypothetical protein	Glycosyl transferase group 2	0.726
CCC13826_0446	pglJ	CCC13826_0446	CCC13826_0453	Hypothetical protein	Iron chelatin ABC transporter substrate binding protein	0.734
CCC13826_0446	pglK	CCC13826_0446	CCC13826_0458	Hypothetical protein	Polysaccharide biosynthesis protein	0.692
CCC13826_0460	CCC13826_0446	CCC13826_0460	CCC13826_0446	Hydroxylamine reductase (hybrid-cluster protein; HCP)	Hypothetical protein	0.882
CCC13826_0460	pglA	CCC13826_0460	CCC13826_0451	Hydroxylamine reductase (hybrid-cluster protein; HCP)	Iron compounds ABC transporter ATP-binding protein	0.883
CCC13826_0460	pglB	CCC13826_0460	CCC13826_0452	Hydroxylamine reductase (hybrid-cluster protein; HCP)	Iron chelatin ABC transporter permease	0.874
CCC13826_0460	pglC	CCC13826_0460	CCC13826_0450	Hydroxylamine reductase (hybrid-cluster protein; HCP)	Cpp29	0.898
CCC13826_0460	pglD	CCC13826_0460	CCC13826_0449	Hydroxylamine reductase (hybrid-cluster protein; HCP)	General glycosylation pathway protein	0.875
CCC13826_0460	pglH1	CCC13826_0460	CCC13826_0454	Hydroxylamine reductase (hybrid-cluster protein; HCP)	Nitric oxide reductase large subunit	0.887
CCC13826_0460	pglH2	CCC13826_0460	CCC13826_0455	Hydroxylamine reductase (hybrid-cluster protein; HCP)	Glycosyl transferase group 1	0.887
CCC13826_0460	pglI	CCC13826_0460	CCC13826_0456	Hydroxylamine reductase (hybrid-cluster protein; HCP)	Glycosyl transferase group 2	0.905
CCC13826_0460	pglJ	CCC13826_0460	CCC13826_0453	Hydroxylamine reductase (hybrid-cluster protein; HCP)	Iron chelatin ABC transporter substrate binding protein	0.889
CCC13826_0460	pglK	CCC13826_0460	CCC13826_0458	Hydroxylamine reductase (hybrid-cluster protein; HCP)	Polysaccharide biosynthesis protein	0.859

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