DVU_1252 protein (Desulfovibrio vulgaris Hildenborough)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

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Predicted Interactions

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Score

DVU_1252

Hypothetical protein (758 aa)

Predicted Functional Partners:

secY

0.889

hmcA

0.751

DVU_2801

0.750

DVU_2804

0.721

DVU_1879

0.692

DVU_0258

0.678

DVU_1081

0.659

DVU_1251

0.622

DVU_2746

0.595

DVU_0694

0.576

Your Current Organism:

Desulfovibrio vulgaris Hildenborough

NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVU_0258	DVU_0694	DVU0258	DVU0694	Sensory box histidine kinase/response regulator	Molybdopterin oxidoreductase, molybdopterin-binding subunit	0.744
DVU_0258	DVU_1081	DVU0258	DVU1081	Sensory box histidine kinase/response regulator	Iron-sulfur cluster-binding protein	0.702
DVU_0258	DVU_1252	DVU0258	DVU1252	Sensory box histidine kinase/response regulator	Hypothetical protein	0.678
DVU_0258	DVU_2801	DVU0258	DVU2801	Sensory box histidine kinase/response regulator	Hypothetical protein	0.482
DVU_0258	hmcA	DVU0258	DVU0536	Sensory box histidine kinase/response regulator	High-molecular-weight cytochrome C; HMWC (high-molecular-weight cytochrome c), ORF2, ORF3, ORF4, ORF5 and ORF6 in the HMC operon form a transmembrane protein complex that allows electron flow from the periplasmic hydrogenase to the cytoplasmic enzymes that catalyze reduction of sulfates	0.779
DVU_0694	DVU_0258	DVU0694	DVU0258	Molybdopterin oxidoreductase, molybdopterin-binding subunit	Sensory box histidine kinase/response regulator	0.744
DVU_0694	DVU_1081	DVU0694	DVU1081	Molybdopterin oxidoreductase, molybdopterin-binding subunit	Iron-sulfur cluster-binding protein	0.505
DVU_0694	DVU_1252	DVU0694	DVU1252	Molybdopterin oxidoreductase, molybdopterin-binding subunit	Hypothetical protein	0.576
DVU_0694	hmcA	DVU0694	DVU0536	Molybdopterin oxidoreductase, molybdopterin-binding subunit	High-molecular-weight cytochrome C; HMWC (high-molecular-weight cytochrome c), ORF2, ORF3, ORF4, ORF5 and ORF6 in the HMC operon form a transmembrane protein complex that allows electron flow from the periplasmic hydrogenase to the cytoplasmic enzymes that catalyze reduction of sulfates	0.717
DVU_1081	DVU_0258	DVU1081	DVU0258	Iron-sulfur cluster-binding protein	Sensory box histidine kinase/response regulator	0.702
DVU_1081	DVU_0694	DVU1081	DVU0694	Iron-sulfur cluster-binding protein	Molybdopterin oxidoreductase, molybdopterin-binding subunit	0.505
DVU_1081	DVU_1252	DVU1081	DVU1252	Iron-sulfur cluster-binding protein	Hypothetical protein	0.659
DVU_1081	DVU_2801	DVU1081	DVU2801	Iron-sulfur cluster-binding protein	Hypothetical protein	0.719
DVU_1081	hmcA	DVU1081	DVU0536	Iron-sulfur cluster-binding protein	High-molecular-weight cytochrome C; HMWC (high-molecular-weight cytochrome c), ORF2, ORF3, ORF4, ORF5 and ORF6 in the HMC operon form a transmembrane protein complex that allows electron flow from the periplasmic hydrogenase to the cytoplasmic enzymes that catalyze reduction of sulfates	0.694
DVU_1251	DVU_1252	DVU1251	DVU1252	Hypothetical protein	Hypothetical protein	0.622
DVU_1252	DVU_0258	DVU1252	DVU0258	Hypothetical protein	Sensory box histidine kinase/response regulator	0.678
DVU_1252	DVU_0694	DVU1252	DVU0694	Hypothetical protein	Molybdopterin oxidoreductase, molybdopterin-binding subunit	0.576
DVU_1252	DVU_1081	DVU1252	DVU1081	Hypothetical protein	Iron-sulfur cluster-binding protein	0.659
DVU_1252	DVU_1251	DVU1252	DVU1251	Hypothetical protein	Hypothetical protein	0.622
DVU_1252	DVU_1879	DVU1252	DVU1879	Hypothetical protein	Glycosyl transferase family protein	0.692

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